Best Crystal + Metaphysical Stores in San Diego

Best Crystal + Metaphysical Stores in San Diego

Looking to add to your growing crystal collection or level up your spell game? Want to find a great spirituality gift or book for a friend? Head to your local botanica or metaphysical store in San Diego and find the spiritual treasures destined for you.


Spiritual gift stores are a fantastic place to browse and shop; with so many trinkets, books, charms, crystals and herbs, you never really know what you’re going to find! We’ve rounded up our list of our favorite crystal stores and metaphysical stores in San Diego County; browse through the list to find the metaphysical store near you.


Crystal Blue Vibrations / Instagram

San Diego Crystal + Metaphysical Stores

Crystal Blue Vibrations (South Park)

Known for its wide selection of high-quality crystals, this store also carries singing bowls, incense, crystal skills and beautiful crystal jewelry. Crystal Blue Vibrations also offers healing services with a wide variety of tarot readers, crystal reiki, flower therapy and sound healing practitioners.

Crystal Blue Vibrations, 2961 Beech St, San Diego

Botanica Mama Roots (Normal Heights)

The oldest wicca, pagan and santeria botanica in San Diego, Botanica Mama Roots offers a wide range of magickal supplies, whichever your path. Note: The store is only open in the afternoons, closed on Mondays.

Botanica Mama Roots, 3512 Adams Ave., San Diego

The Divine Bubble (University Heights)

The Divine Bubble identifies as a metaphysical crystal boutique and healing center. Great spot to gather your unique crystals for your altars and spiritual rituals. The store also stocks candles, incense and other accessories for your metaphysical needs.

The Divine Bubble, 4639 30th Street, San Diego

The Cave of Wonders (North Park)

Recently reopened in a new location, The Cave of Wonders is a beloved crystal shop founded by a certified gemologist in San Diego, carrying crystals, jewelry, wands, clothing and other spiritual treasures.

The Cave of Wonders, 3819 Ray Street, San Diego


Fabiola Reyes, Healer at B-Intuitive / Instagram

B-Intuitive Metaphysical Store + Healing Center (North Park)

B-Intuitive bills itself as a one-stop-shop for all your metaphysical and spiritual needs. Along with crystals, incense, candles, oils, books, gifts and more, you can also book psychic readings, quick limpias, reiki sessions and other healing services with B-Intuitive’s many energy healing practitioners.

B-Intuitive, 3556 University Avenue, San Diego

Earth’s Elements (Hillcrest)

The newest Earth’s Elements location, this Hillcrest store carries all of the finest spiritual gifts, including art, crystals, statues, crystal bowls, tarot decks and books, and a whole section dedicated just to selenite.

Head over to Little Italy, or drive up to Carlsbad or Encinitas to visit their other locations.

Earth’s Elements, 423 University Ave San Diego (Hillcrest)

1608 India St Suite 105, San Diego (Little Italy)

300 Carlsbad Village Dr. #106 B, Carlsbad (Carlsbad)

559 S Coast Hwy 101, Encinitas (Encinitas)

South American Imports (Old Town)

One of San Diego’s largest crystal and rock shops, located right in the heart of Old Town.

South American Imports, 2461 San Diego Ave #104, San Diego

Alexandra Institute (Midway)

Tucked away in a small strip mall in Midway, Alexandra’s metaphysical bookstore is actually a portal into all things spiritual. Browse the many books and gifts about angels, plus jewelry from local artisans, incense, crystals and more. The Alexandra Institute also offers healing and psychic services as well as spiritual classes.

Alexandra Institute Bookshop, 2461 San Diego Ave #104, San Diego


Tree Of Life / Instagram

Crystal Visions Rock Shop (Ocean Beach)

Serving the community since 2006, Crystal Visions is known for beautifully sourced, hand-selected gemstones, jewelry, singing bowls, books, oracle decks and more.

Crystal Visions Rock Shop, 4966 Santa Monica Avenue, Suite K, San Diego

Tree of Life Books and Gifts (Ocean Beach)

Stock up on your metaphysical + magickal supplies, browse the latest books by spiritual authors and practitioners and find your perfect tarot deck for your readings. You can also book readings and healing services on their website. Note: The store is currently only open certain days – check their website for the latest schedule.

Tree of Life, 4870 Santa Monica Ave., Suite 1A, San Diego

The Philosopher’s Stone Crystal Shop (Ocean Beach)

Offering a complete collection of crystals, rocks and gems with knowledgeable staff to help you select the right rocks for your needs.

The Philosopher’s Stone, 4967 Newport Ave., #5, San Diego

Lavande Wellness Boutique (Bird Rock / La Jolla)

This divine feminine portal features spiritual books, tarot decks, crystals, jewelry, ritual kits + handmade art from smashed crystals. You can also book energy healing + spiritual services with their healers.

Lavande Spiritual Wellness Boutique, 5544 La Jolla Blvd., Bird Rock

Totem Boutique (La Jolla)

Located inside wellness mecca Trilogy Sanctuary, the Totem Boutique’s shop selection includes sustainable apparel, handmade gifts, organic bath and body care, crystals and metaphysical gifts.

Totem Trilogy, 7650 Girard Ave #400, La Jolla


AgevCo / Instagram

South Bay San Diego Metaphysical Stores

AgevCo (Barrio Logan)

This Black-owned business offers stunning handmade crystal jewelry, crystals, art, sage and incense, and many more metaphysical and spiritual gift items.

AgevCo, 2195 Logan Ave #1 San Diego

Botanica El Secreto (National City)

Large metaphysical store offering a huge range of metaphysical and spiritual supplies, from candles, tarot decks, jewelry, incense, crystals, statues and more.

Botanica El Secreto, 1021 Highland Ave A 45, National City

East County San Diego Metaphysical Stores

Amethyst Moon (La Mesa)

This large mystical and spiritual gift shop carries a wide range of crystals, candles, essential oils, jewelry, clothing, singing bowls and much more. You can also book a session with a medical intuitive, psychic or reiki healer.

Amethyst Moon, 8329 La Mesa Blvd, La Mesa

Moonshine Magic (Julian)

A small boutique shop featuring crystals, rocks, and minerals plus handmade candles, crafts + more.

Moonshine Magic, 2608 B Street, Julian

North County San Diego Metaphysical Stores

Soulscape (Encinitas)

Soulscape, located right on Hwy 101 in downtown Encinitas, offers a wide selection of crystals and rocks plus an extensive spiritual book selection, gifts, candles, yoga supplies, incense and unique jewelry.

Soulscape, 765 S. Coast Highway 101, Suite 106, Encinitas

Self-Realization Fellowship Books + Gifts (Encinitas)

Run by the Self-Realization Fellowship, which also has a presence in Encinitas, this book and gift store has many high quality home decor, statues and jewelry items from Asia plus a large spiritual book selection, incense, candles, art and other devotional items. Note: The store is currently only open Thurs-Sun from 12-4.

Self-Realization Fellowship Bookstore, 1150 S Coast Hwy 101 Encinitas

Child of Wild (Encinitas)

The Child of Wild boutique in Leucadia on the Hwy 101 features spiritually-centered jewelry, a “charm bar” to craft your own jewelry, plus a small selection of crystals, candles and other spiritual items.

Child of Wild, 1114 N Coast Hwy 101 #1C, Encinitas

Village Rock Shop (Carlsbad)

In this crystal, gem and rock shop, you’ll find a carefully selected college of crystals and gemstones from around the world. Shop owner Xenia and their staff will help you find the right crystal for your needs.

Village Rock Shop, 2690 State St, Suite A, Carlsbad

Mystical Dragon (Carlsbad)

Mystical Dragon, located in Carlsbad Village, is a spiritual gift shop and a new age bookstore that carries crystals, candles, jewelry, and psychic readings for all the important moments during your life journey.

Mystical Dragon, 2860 State St, Carlsbad


Mystic Soul Ritual Shop (Oceanside)

Mystic Soul Ritual Shop is a space for quality handmade spiritual tools and beautiful hand selected crystals from all over the world. Plus, the shop carries magickal and apothecary items for all your spiritual needs.

Mystic Soul Ritual Shop, 212 Artist Alley Ste E, Oceanside

Kindred Journeys (Oceanside)

Offering psychic readings, spiritual healing services + classes alongside a shop full of beautiful crystals + metaphysical supplies.

Kindred Journeys, 510 North Coast Hwy, Oceanside

Beads, Crystals + More (Vista)

Originally opened in Encinitas, the Beads, Crystals + More’s new location in Vista is full of jewelry, crystals and a large, unique collection of beads from across the globe. The beads selection is quite special with some beads being hundreds of years old!

Beads, Crystals + More, 350 E. Broadway, Vista, CA

L.E.A.F. – Live Enlightened and Free (Vista)

Just opened in a new location, the L.E.A.F. gift store offers mindful living gifts that support local artisans, handmade items and fair trade companies. Inside the beautiful space, you’ll find statues, plants, home decor, candles, incense, crystals and other spiritual gifts for your home or a friend.

L.E.A.F., 3225 Business Park Drive, Suite 4, Vista

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